Read-only biomedical MCP server connecting 50+ biomedical
databases. One command grammar for all entities — genes,
variants, diseases, drugs, trials, articles, phenotypes,
pathways, proteins, diagnostics, and adverse events. 27
tools, Apache-2.0 license.
Overview
标题：BioMCP · Biomedical MCP Server
One command. 50+ biomedical databases.
BioMCP is a read-only biomedical MCP server connecting
PubMed, ClinicalTrials.gov, ClinVar, gnomAD, OncoKB,
Reactome, KEGG, UniProt, PharmGKB, CPIC, OpenFDA, Monarch
Initiative, GWAS Catalog, and more.
Quickstart
docker pull jackgucci/biomcp:0.8.22
docker run -d -p 8080:8080 jackgucci/biomcp:0.8.22
Test: curl http://localhost:8080/health
GitHub
https://github.com/gucci10248/JEFFREY
Server Config
{
"mcpServers": {
"biomcp": {
"command": "docker",
"args": [
"run",
"-i",
"--rm",
"-p",
"8080:8080",
"jackgucci/biomcp:0.8.22"
]
}
}
}