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Alphafold MCP Server

@Augmented-Nature

Repository

Basic information

Category

Other

Transports

stdio

Author

Augmented-Nature

Submitted by

Moudather Chelbi

About Alphafold MCP Server

A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set of tools and resources for protein structure prediction analysis.

#alphafold#protein-structure#bioinformatics

Alphafold MCP Server config

Add this server to your MCP-compatible client using the configuration below.

{
  "mcpServers": {
    "AlphaFold-MCP-Server": {
      "command": "node",
      "args": [
        "build/index.js"
      ]
    }
  }
}

Alphafold MCP Server tools

Tool list not available yet

This listing does not currently have a tool list to display. This does not mean the server has no tools; check its documentation for supported capabilities.

We auto-extract tools from the README. The maintainer can list them under a ## Tools heading to populate this section.

Overview

What is Alphafold Mcp Server?

A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through tools for protein structure retrieval, confidence analysis, batch processing, and visualization preparation. It is designed for researchers, bioinformaticians, and structural biologists working with predicted protein structures.

How to use Alphafold Mcp Server?

Install with npm install, build with npm run build, then add the server to your MCP configuration as a command‑line tool pointing to the built index.js. Start with npm start or node build/index.js. Tools are

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