What does OWL-MCP do?
It provides MCP function calls for finding, adding, or removing OWL axioms in a local ontology file, keeping an in‑memory model synced with the disk.
@ai4curation
Basic information
MCP server for OWL applications
Add this server to your MCP-compatible client using the configuration below.
{
"mcpServers": {
"owl-mcp": {
"command": "uvx",
"args": [
"owl-mcp"
]
}
}
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OWL‑MCP is a Model‑Context‑Protocol (MCP) server for working with Web Ontology Language (OWL) ontologies. It lets AI assistants—via any MCP‑enabled host—add, find, or remove OWL axioms stored on disk, keeping an in‑memory model in sync with the file.
Install an MCP‑enabled host such as Goose (desktop or CLI), then add OWL‑MCP as an extension using uvx owl-mcp. After configuration, you can ask the AI to create an ontology or add axioms; each operation references a local OWL file path. Any format supported by py‑horned‑owl is accepted, and OWL functional syntax is used for the API calls.
It provides MCP function calls for finding, adding, or removing OWL axioms in a local ontology file, keeping an in‑memory model synced with the disk.
OWL‑MCP requires `uvx` to run and any MCP‑enabled AI host (e.g., Goose). It uses the py‑horned‑owl library under the hood to parse and write OWL files in any supported format.
The ontology data lives in a local OWL file on your disk. All CRUD operations read from and write to that file, and the server syncs the in‑memory model automatically.
Yes. Because the server synchronises changes to disk, Protégé—if pointed at the same file—will automatically see updates.
The API works with OWL axioms as strings written in OWL functional syntax, which is also the recommended source format following OBO guidelines.
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