Biomart MCP

Name: Biomart MCP
Author: jzinno

@jzinno

Repository

About Biomart MCP

A MCP server to interface with Biomart

Basic information

Config

Add this server to your MCP-compatible client using the configuration below.

{
  "mcpServers": {
    "biomart-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@smithery/cli",
        "install",
        "@jzinno/biomart-mcp",
        "--client",
        "claude"
      ]
    }
  }
}

Tools

No tools detected

We auto-extract tools from the README. The maintainer can list them under a ## Tools heading to populate this section.

Overview

What is Biomart MCP?

Biomart MCP is a Model Context Protocol server that provides a programmatic interface to Biomart databases via the pybiomart package. It allows LLMs to discover marts and datasets, explore attributes and filters, retrieve biological data, and translate biological identifiers.

How to use Biomart MCP?

Install via Smithery (npx -y @smithery/cli install @jzinno/biomart-mcp --client claude) or by cloning the repository and configuring for Claude Desktop with `uv run