Extreme P Value MCP Server

@koido

Basic information

About Extreme P Value MCP Server

No overview available yet

Extreme P Value MCP Server config

Add this server to your MCP-compatible client using the configuration below.

{
  "mcpServers": {
    "extreme-p-mcp": {
      "command": "uv",
      "args": [
        "sync"
      ]
    }
  }
}

Extreme P Value MCP Server tools

Tool list not available yet

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Overview

What is Extreme P Value MCP Server?

This MCP server provides an API interface for extreme p-value calculations (z, t, F, chi‑square, SAIGE, Wald) that are implemented in the R script extreme-P.R, accessed via Python using pyper and served with FastMCP. It is intended for researchers and statisticians who need high‑precision p‑values for extreme test statistics.

How to use Extreme P Value MCP Server?

Install dependencies with uv sync, then start the server with uv run server.py. API endpoints such as /pvalue_extreme_z(z: float) are available, and the helper class ExtremePHelper in extreme_p_helper.py provides a direct Python interface.

Key features of Extreme P Value MCP Server?

Extreme p‑value computations for z, t, F, chi‑square, SAIGE, and Wald.
Returns results as mantissa and exponent.
Built with FastMCP for easy API access.
Integrates R calculations via the pyper bridge.
Simple setup using uv and a single pyproject.toml.

Use cases of Extreme P Value MCP Server?

Computing extremely small p‑values in genome‑wide association studies.
Evaluating statistical significance in fixed‑effect meta‑analyses.
Handling p‑values beyond standard floating‑point precision.
Using the SAIGE method for case‑control study p‑values.
Automating p‑value calculations in a server‑based workflow.

Frequently asked questions

What dependencies are required?

You need `uv`, `pyper`, `fastmcp`, and `mcp[cli]`. All are defined in `pyproject.toml`.

Is the server stable and ready for production?

No — the project is under active development and its APIs and features may change without notice.

How do I start the server?

Run `uv sync` to install dependencies, then `uv run server.py`.

What API endpoints does the server provide?

Endpoints include `/pvalue_extreme_z`, `/pvalue_extreme_t`, `/pvalue_extreme_f`, `/pvalue_extreme_chisq`, `/pvalue_extreme

Comments

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